Step | Annotation |
---|---|
Step 1: Input dataset
select at runtime
|
FASTA reference genome |
Step 2: Input dataset
select at runtime
|
FASTQsanger FWD |
Step 3: Input dataset
select at runtime
|
FASTQsanger REV |
Step 4: velveth
Not available.
False
Input Files
Input Files 1
fastq
shortPaired reads
Output dataset 'output' from step 2
Input Files 2
fastq
shortPaired2 reads
Output dataset 'output' from step 3
|
|
Step 5: velvetg
Output dataset 'out_file1' from step 4
No
No
No
False
None
None
Yes
200
Yes
250
Use Defaults
|
|
Step 6: Unknown Tool with id 'bwasw_demo'
|
|
Step 7: SAM-to-BAM
Use a genome from the history
Output dataset 'output' from step 6
Output dataset 'output' from step 1
|
|
Step 8: Flagstat
Output dataset 'output1' from step 7
|
curtish
All published workflows
Published workflows by curtish